The NCAA badminton championship is a demonstration sport that was introduced in its 2009–10 season. No tournament was held in season 87.

  Demonstration sport
  Denotes school won the triple crown
  Denotes school won 2 of 3 divisions in the same year

Academic Year	Men	Women	Juniors
2009–10	Emilio Aguinaldo College (1)	De La Salle–College of Saint Benilde (1)	Colegio de San Juan de Letran (1)
2010–11	De La Salle–College of Saint Benilde (1)	De La Salle–College of Saint Benilde (2)	La Salle Green Hills (1)
2011–12	Not held
2014–15	Colegio de San Juan de Letran (1)	De La Salle–College of Saint Benilde (3)	La Salle Green Hills (2)
2015–16	De La Salle–College of Saint Benilde (2)	De La Salle–College of Saint Benilde (4)	La Salle Green Hills (3)
2016–17	Colegio de San Juan de Letran (2)	Arellano University (1)	Colegio de San Juan de Letran (2)
2017–18	San Beda College (1)	Arellano University (2)	San Beda College–Rizal (1)
2018–19	San Beda University (2)	De La Salle–College of Saint Benilde (5)
2019–20	San Beda University (3)		Colegio de San Juan de Letran (3)
2020–21	Not held due to the COVID-19 pandemic.
2021–22
2022–23
2023–24	San Beda University (4)	San Sebastian College–Recoletos (1)	San Sebastian College–Recoletos (1)
2024–25	De La Salle–College of Saint Benilde (3)	San Beda University (1)	San Sebastian College–Recoletos (2)

School	Men	Women	Juniors	Total
De La Salle–College of Saint Benilde	3	5	0	8
San Beda University	4	1	1	6
Colegio de San Juan de Letran	2	0	3	5
La Salle Green Hills	0	0	3	3
San Sebastian College–Recoletos	0	1	2	3
Arellano University	0	2	0	2
Emilio Aguinaldo College	1	0	0	1

• UAAP Badminton Championship

• Champions list at the official NCAA Philippines website