This is a list of football (soccer) clubs in South Sudan. For a complete list see Category:Football clubs in South Sudan

• Al-Hilal FC (Juba)
• Al-Malakia FC
• Al Merreikh FC (South Sudan)
• Atlabara FC
• El Nasir FC
• Kator FC
• Lion Hunters F.C.
• Munuki FC
• Rainbow FC (South Sudan)
• Rapta FC
• Talanga FC

• Nile Eagle FC
• Nimule Customs F.C.
• Young Stars FC

• Zalan FC

• Aweil Stars F.C.
• Ayat Stars FC
• Islah FC
• Mabil F.C.
• Merreikh Aweil F.C.
• Red Army FC
• Salaam Aweil F.C.
• Wanyjok F.C.

. Bentiu City Sports Club

• Koryom F.C.

• Al-Hilal FC (Wau)
• Al-Salam FC

• Nile City F.C.

• Yei Joint Stars F.C.

• South Sudan 2011
• South Sudan 2012
• South Sudan 2013